STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_4482PFAM: sulfatase; KEGG: sulfatase. (680 aa)    
Predicted Functional Partners:
Bccel_1775
PFAM: sulfatase; KEGG: sulfatase.
  
  
  0.889
Bccel_2385
PFAM: sulfatase; KEGG: sulfatase.
  
  
  0.884
Bccel_5639
PFAM: sulfatase; KEGG: phosphoglycerol transferase (alkaline phosphatase superfamily).
  
  
 
0.788
Bccel_5102
PFAM: Monogalactosyldiacylglycerol synthase, Glycosyltransferase 28 domain-containing protein; KEGG: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
  
 
 0.748
Bccel_1115
KEGG: hypothetical protein.
  
     0.585
Bccel_5755
PFAM: restriction endonuclease, DNA methylase N-4/N-6 domain protein; KEGG: restriction endonuclease.
  
     0.565
Bccel_4481
KEGG: MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE.
       0.496
Bccel_5350
Hypothetical protein; KEGG: ABC transporter.
  
     0.473
Bccel_4721
PFAM: Glyoxalase-like domain; KEGG: glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.465
Bccel_5351
KEGG: hypothetical protein.
  
     0.441
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.