STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_4484Beta-glucosidase; KEGG: glycoside hydrolase family 3; PFAM: glycoside hydrolase family 3 domain protein, Fibronectin type III-like domain. (690 aa)    
Predicted Functional Partners:
Bccel_4009
PFAM: glycoside hydrolase family 3 domain protein; KEGG: beta-N-acetylhexosaminidase; Belongs to the glycosyl hydrolase 3 family.
 
  
0.802
Bccel_3397
KEGG: peptidoglycan N-acetylglucosamine deacetylase; PFAM: polysaccharide deacetylase, glycoside hydrolase family 18; SMART: chitinase II.
    
 0.784
Bccel_2005
KEGG: glycosyltransferase; PFAM: glycosyltransferase 36, carbohydrate binding protein, glycosyltransferase 36 associated protein; SMART: carbohydrate binding protein.
    
 0.775
Bccel_0904
Glycosyltransferase 36; KEGG: cellobiose phosphorylase; PFAM: glycosyltransferase 36, glycosyltransferase 36 associated protein, carbohydrate binding protein; SMART: carbohydrate binding protein.
    
 0.762
Bccel_3298
Beta-glucosidase; KEGG: bxlB, beta-xylosidase BxlB; PFAM: glycoside hydrolase family 3 domain protein, Fibronectin type III-like domain.
 
  
 
0.729
Bccel_5320
KEGG: bglX, beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein, Fibronectin type III-like domain.
 
  
 
0.724
Bccel_5508
Cellulase; KEGG: endoglucanase; PFAM: glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.718
Bccel_4485
KEGG: dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR.
     
 0.692
Bccel_4498
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 0.679
Bccel_1744
PFAM: beta-lactamase; KEGG: beta-lactamase.
  
 
 0.674
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.