Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_4541PFAM: stress protein; KEGG: hypothetical protein. (417 aa)    
Predicted Functional Partners:
Bccel_1424
PFAM: Tellurite resistance TerB; KEGG: terB, tellurium resistance protein.
 
   
 0.795
Bccel_5702
PFAM: sucrose-6F-phosphate phosphohydrolase; KEGG: hypothetical protein.
 
     0.783
Bccel_5703
PFAM: protein of unknown function UCP020979; KEGG: hypothetical protein.
 
     0.783
Bccel_5704
PFAM: Domain of unknown function DUF3706; KEGG: hypothetical protein.
 
     0.783
Bccel_5706
KEGG: hypothetical protein.
 
     0.782
Bccel_5705
KEGG: putative ATP/GTP-binding protein.
 
     0.781
Bccel_5709
PFAM: stress protein; KEGG: stress protein.
  
     0.775
Bccel_5037
PFAM: Domain of unknown function DUF4356; KEGG: putative tellurium resistance protein.
 
    0.766
Bccel_5701
Hypothetical protein; KEGG: carbamoylphosphate synthase large subunit.
  
     0.755
Bccel_3450
PFAM: stress protein; KEGG: hypothetical protein.
 
  
0.618
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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