Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_4604PFAM: Pyridoxamine 5'-phosphate oxidase-related; KEGG: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein. (153 aa)    
Predicted Functional Partners:
Bccel_4603
PFAM: Methyltransferase type 11; KEGG: type 12 methyltransferase.
       0.671
Bccel_4605
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-3 domain protein, histidine kinase A domain protein; KEGG: PAS/PAC sensor domain-containing signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAC repeat-containing protein, PAS domain containing protein.
       0.623
Bccel_3070
PFAM: Uncharacterized protein family UPF0311; KEGG: cellulosome protein dockerin type I.
     
 0.570
Bccel_4602
KEGG: hypothetical protein; PFAM: Stress responsive alpha-beta barrel domain-containing protein; SMART: Stress responsive alpha-beta barrel domain-containing protein.
 
     0.514
Bccel_2017
KEGG: pyridoxal phosphate synthase yaaE subunit; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2; PFAM: SNO glutamine amidotransferase.
     
 0.500
pdxS
Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.
    
 0.500
Bccel_5660
PFAM: Rubredoxin domain; KEGG: rubredoxin-type Fe(Cys)4 protein.
    
  0.461
Bccel_3718
KEGG: flavin reductase domain-containing FMN-binding protein; PFAM: flavin reductase domain protein FMN-binding protein; SMART: flavin reductase domain protein FMN-binding protein.
    
  0.455
Bccel_4738
KEGG: flavoredoxin; PFAM: flavin reductase domain protein FMN-binding protein; SMART: flavin reductase domain protein FMN-binding protein.
    
  0.455
Bccel_1435
KEGG: hypothetical protein.
     
 0.445
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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