Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_4923KEGG: cellulosome anchoring protein cohesin subunit. (482 aa)    
Predicted Functional Partners:
Bccel_4924
KEGG: hypothetical protein.
       0.773
Bccel_4925
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
       0.639
Bccel_4926
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
       0.639
Bccel_4919
PFAM: glycosyl transferase family 2; KEGG: family 2 glycosyl transferase; overlaps another CDS with the same product name.
       0.636
Bccel_4920
PFAM: glycosyl transferase family 2; KEGG: glycosyltransferase; overlaps another CDS with the same product name.
       0.636
Bccel_4921
Hypothetical protein; KEGG: type 11 methyltransferase.
       0.636
Bccel_4922
PFAM: polysaccharide biosynthesis protein; KEGG: polysaccharide biosynthesis protein.
       0.636
Bccel_4918
KEGG: hypothetical protein.
       0.516
Bccel_4917
PFAM: glycosyl transferase group 1; KEGG: capsular polysaccharide biosynthesis protein.
       0.464
Bccel_4927
Glucose-1-phosphate thymidylyltransferase; KEGG: nucleotidyltransferase; PFAM: Nucleotidyl transferase.
       0.460
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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