STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_4927Glucose-1-phosphate thymidylyltransferase; KEGG: nucleotidyltransferase; PFAM: Nucleotidyl transferase. (240 aa)    
Predicted Functional Partners:
Bccel_4926
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 0.999
Bccel_4928
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 0.999
Bccel_4925
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 0.998
Bccel_3822
PFAM: Nucleotidyl transferase; KEGG: Nucleoside-diphosphate-sugar pyrophosphorylase family protein.
 
 
0.964
Bccel_1010
Mannose-1-phosphate guanylyltransferase, Phosphoglucosamine mutase; KEGG: nucleotidyltransferase; PFAM: Nucleotidyl transferase, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, transferase hexapeptide repeat containing protein.
  
 
0.960
Bccel_3823
Phosphoglucosamine mutase; KEGG: nucleotidyltransferase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, transferase hexapeptide repeat containing protein.
 
 
 0.960
Bccel_4922
PFAM: polysaccharide biosynthesis protein; KEGG: polysaccharide biosynthesis protein.
 
  
 0.916
Bccel_1849
Nucleotide sugar dehydrogenase; SMART: UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; KEGG: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase dimerization.
  
 
 0.911
Bccel_5294
Nucleotide sugar dehydrogenase; SMART: UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; KEGG: udg, UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase dimerization.
  
 
 0.911
Bccel_4920
PFAM: glycosyl transferase family 2; KEGG: glycosyltransferase; overlaps another CDS with the same product name.
 
  
 0.887
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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