Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_4928dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (281 aa)    
Predicted Functional Partners:
Bccel_4925
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 0.999
Bccel_4927
Glucose-1-phosphate thymidylyltransferase; KEGG: nucleotidyltransferase; PFAM: Nucleotidyl transferase.
 
 0.999
Bccel_4926
TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 0.998
Bccel_1845
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: algA, mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase, mannose-6-phosphate isomerase type II; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.917
Bccel_5295
PFAM: WxcM-like domain-containing protein.
  
 
 0.912
Bccel_5296
Hypothetical protein; KEGG: dTDP-4-dehydrorhamnose 3,5 epimerase.
  
 
 0.912
Bccel_4920
PFAM: glycosyl transferase family 2; KEGG: glycosyltransferase; overlaps another CDS with the same product name.
 
  
 0.892
Bccel_1867
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.828
Bccel_1837
PFAM: glycosyl transferase family 2; KEGG: family 2 glycosyl transferase.
 
  
 0.823
Bccel_5293
UDP-glucuronate decarboxylase; KEGG: NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
 
 0.818
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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