Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_4940Hypothetical protein; KEGG: Cellulose binding domain-containing protein. (474 aa)    
Predicted Functional Partners:
Bccel_3489
Hypothetical protein; KEGG: fibronectin type III domain-containing protein.
  
 0.821
Bccel_4693
KEGG: Cohesin domain protein; PFAM: cellulosome anchoring protein cohesin region, type 3a cellulose-binding domain protein; SMART: type 3a cellulose-binding domain protein.
  
 
 
 0.778
Bccel_0723
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.766
Bccel_0722
PFAM: lipolytic protein G-D-S-L family; KEGG: glycoside hydrolase family protein.
    
 0.752
Bccel_2462
PFAM: lipolytic protein G-D-S-L family; KEGG: glycoside hydrolase family protein.
    
 0.752
Bccel_0386
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.743
Bccel_2494
PFAM: Domain of unknown function DUF4347, S-layer domain-containing protein; KEGG: cell wall/surface repeat protein.
    
   0.741
Bccel_3957
KEGG: Cohesin domain protein; PFAM: cellulosome anchoring protein cohesin region, type 3a cellulose-binding domain protein; SMART: type 3a cellulose-binding domain protein.
  
 
 
 0.729
Bccel_5381
PFAM: S-layer domain-containing protein, Leucine rich repeat 4, EF-Hand domain protein; KEGG: putative surface layer protein.
  
 
   0.717
Bccel_0506
Hypothetical protein; KEGG: cellulose 1,4-beta-cellobiosidase.
  
 
   0.681
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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