STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_5004TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family. (293 aa)    
Predicted Functional Partners:
Bccel_5024
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: chromosome partitioning ATPase.
 
 0.901
Bccel_4817
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cobyrinic acid a,c-diamide synthase.
 
 0.899
Bccel_3056
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cobyrinic acid a,c-diamide synthase.
 
 0.898
Bccel_5450
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cobyrinic acid a,c-diamide synthase.
 
 0.898
Bccel_2212
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cobyrinic acid a,c-diamide synthase.
 
 0.892
Bccel_2879
Transcriptional regulator, XRE family; KEGG: soJ, sporulation initiation inhibitor protein soj; PFAM: Cobyrinic acid ac-diamide synthase, helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
 0.890
Bccel_1563
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: hypothetical protein.
 
 0.883
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.869
Bccel_5752
KEGG: parB-like partition protein; Belongs to the ParB family.
 
   
0.725
Bccel_5757
KEGG: parB-like partition protein.
 
   
0.725
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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