STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_5200PFAM: GCN5-related N-acetyltransferase; KEGG: N-acetyltransferase GCN5. (148 aa)    
Predicted Functional Partners:
Bccel_1238
KEGG: MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR.
  
     0.705
Bccel_4728
PFAM: YoaP-like domain, GCN5-related N-acetyltransferase; KEGG: hypothetical protein.
  
     0.666
Bccel_4801
PFAM: Glyoxalase-like domain; KEGG: glyoxalase.
  
  
  0.662
Bccel_4563
SMART: regulatory protein MarR; KEGG: MarR family transcriptional regulator.
  
   
 0.640
Bccel_4591
PFAM: Uncharacterized conserved protein UCP021328; KEGG: hypothetical protein.
  
     0.631
Bccel_3961
KEGG: AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.
  
     0.599
Bccel_2994
Helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
  
  0.562
Bccel_5201
Hypothetical protein.
       0.559
Bccel_4624
KEGG: hypothetical protein.
  
     0.514
Bccel_4727
KEGG: DNA repair photolyase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
     0.505
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.