STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_5704PFAM: Domain of unknown function DUF3706; KEGG: hypothetical protein. (485 aa)    
Predicted Functional Partners:
Bccel_5703
PFAM: protein of unknown function UCP020979; KEGG: hypothetical protein.
  
 0.995
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 0.986
Bccel_5705
KEGG: putative ATP/GTP-binding protein.
   
 0.973
Bccel_5702
PFAM: sucrose-6F-phosphate phosphohydrolase; KEGG: hypothetical protein.
  
 0.937
Bccel_5706
KEGG: hypothetical protein.
   
 0.933
Bccel_1565
KEGG: IMP dehydrogenase/GMP reductase; PFAM: IMP dehydrogenase/GMP reductase, CBS domain containing protein.
  
 
 0.924
Bccel_5701
Hypothetical protein; KEGG: carbamoylphosphate synthase large subunit.
 
 
 0.903
Bccel_5709
PFAM: stress protein; KEGG: stress protein.
 
    0.873
Bccel_3705
TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein, AIR synthase related protein.
  
  
 0.871
Bccel_1321
SMART: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; KEGG: adenylosuccinate lyase; PFAM: Lyase 1, N-terminal, Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.868
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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