STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD14711.1PFAM: FAD dependent oxidoreductase; KEGG: mgi:Mflv_1296 FAD dependent oxidoreductase. (376 aa)    
Predicted Functional Partners:
ACD19414.1
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bxe:Bxe_B1598 sarcosine oxidase, alpha subunit, heterotetrameric; Belongs to the GcvT family.
 
 0.984
ACD19413.1
PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: bxe:Bxe_B1599 SoxD.
 
 0.944
ACD19415.1
PFAM: Sarcosine oxidase gamma subunit; KEGG: bxe:Bxe_B1597 sarcosine oxidase, gamma subunit.
 
 0.934
ACD16298.1
PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2709 hypothetical protein.
  
  
 
0.929
ACD15214.1
PFAM: aminotransferase class V; KEGG: bch:Bcen2424_0828 aminotransferase, class V.
 
 
 0.928
ACD18802.1
PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0746 putative oxidoreductase.
  
  
 
0.928
ACD20835.1
PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_4345 FAD dependent oxidoreductase.
  
  
 
0.928
ACD20416.1
PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1501 FAD dependent oxidoreductase.
  
  
 
0.927
ACD19412.1
TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1600 sarcosine oxidase, beta subunit, heterotetrameric.
  
  
 
0.922
ACD21248.1
Serine--glyoxylate transaminase; PFAM: aminotransferase class V; KEGG: bxe:Bxe_B3001 serine--glyoxylate transaminase.
  
 
 0.916
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.