STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD15037.1PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_A4088 hypothetical protein. (166 aa)    
Predicted Functional Partners:
ACD20901.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_B2583 putative CaiB/BaiF family protein; Belongs to the CoA-transferase III family.
 
 
 0.923
sucC
succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
   
 
  0.906
sucD
succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 
 0.904
ACD15043.1
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_A4082 citrate lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.803
ACD15040.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A4085 putative acyl-CoA dehydrogenase.
 
 0.705
ACD20899.1
PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_B2581 putative citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.683
ACD15039.1
PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_A4086 hypothetical protein.
 
    0.679
ACD15041.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A4084 putative L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
 
 0.593
ACD20902.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B2584 putative acyl-CoA dehydrogenase.
 
 0.588
ACD15086.1
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_A4037 putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.481
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.