STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD15229.1PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B2438 predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family. (412 aa)    
Predicted Functional Partners:
ACD15228.1
PFAM: pyruvate carboxyltransferase; KEGG: ppu:PP_3394 3-hydroxy-3-methylglutaryl-CoA lyase, putative.
 
  0.847
ACD15230.1
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0920 major facilitator superfamily (MFS)metabolite/H+ symporter.
       0.565
ACD15227.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppu:PP_3395 transcriptional regulator, LysR family.
       0.428
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.