STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD15371.1TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A3685 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family. (394 aa)    
Predicted Functional Partners:
ACD15372.1
TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A3684 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
ACD15370.1
TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bxe:Bxe_A3686 ABC branched chain amino acid family transporter, ATPase subunit.
 
 0.996
ACD15369.1
Urea ABC transporter, ATP-binding protein UrtE; KEGG: bxe:Bxe_A3687 ABC branched chain amino acid family transporter, ATPase subunit; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.994
ACD15373.1
TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bxe:Bxe_A3683 ABC branched chain amino acid family transporter, periplasmic ligand binding protein.
 
 
 0.990
ACD14585.1
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C0431 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 0.976
ACD20100.1
PFAM: inner-membrane translocator; KEGG: rpd:RPD_4291 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.974
ACD14499.1
KEGG: bbt:BBta_2996 putative amidase expression-regulating protein.
 
 
 0.968
ACD14502.1
PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO2655 conserved hypothetical protein; putative signal peptide.
 
 
 0.964
ACD20101.1
KEGG: azc:AZC_3889 putative UreA/short-chain amide transport system substrate-binding protein precursor.
 
 
 0.963
ACD14505.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C1307 ABC branched chain amino acid family transporter, ATPase subunit.
 
 
 0.929
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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