STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD16371.1PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2238 putative glycosyl transferase, group 1. (409 aa)    
Predicted Functional Partners:
ACD16370.1
KEGG: bxe:Bxe_A2239 putative transmembrane protein.
 
   
 0.951
ACD16368.1
PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A2241 putative glycosyl transferase, family 2, involved in cell wall biogenesis.
  
 0.950
ACD16372.1
PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2237 predicted glycosyl transferase, group 1.
 
   
 0.913
ACD16369.1
KEGG: bxe:Bxe_A2240 putative glycosyltransferase group 1, RfaG-like.
 
   
 0.851
ACD16376.1
KEGG: bxe:Bxe_A2230 hypothetical protein.
  
  
 0.771
ACD21242.1
PFAM: NHL repeat containing protein; KEGG: bte:BTH_II0693 hypothetical protein.
  
    0.748
ACD18979.1
KEGG: bxe:Bxe_B0905 hypothetical protein.
  
    0.725
ACD19018.1
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bte:BTH_II0077 hypothetical protein.
  
    0.721
ACD20347.1
PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_B2250 putative glycosyltransferase.
  
     0.609
ACD16363.1
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bxe:Bxe_A2246 undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.588
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.