Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACD16379.1PFAM: acyltransferase 3; KEGG: bxe:Bxe_A2227 putative lipopolysaccharide biosynthesis-related membrane protein. (403 aa)    
Predicted Functional Partners:
ACD16375.1
PFAM: acyltransferase 3; KEGG: bxe:Bxe_A2232 putative membrane-located cell surface O-antigen acetylase.
  
     0.767
ACD20381.1
PFAM: acyltransferase 3; KEGG: bxe:Bxe_B2282 putative acyltransferase.
  
     0.748
ACD15834.1
PFAM: acyltransferase 3; KEGG: bxe:Bxe_A3032 putative membrane protein, acyltransferase family.
  
     0.725
ACD15252.1
PFAM: acyltransferase 3; KEGG: bxe:Bxe_A3854 putative acyltransferase.
  
     0.721
ACD18979.1
KEGG: bxe:Bxe_B0905 hypothetical protein.
  
   
 0.715
ACD19018.1
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bte:BTH_II0077 hypothetical protein.
  
   
 0.712
ACD21297.1
KEGG: bxe:Bxe_B3026 putative replication protein.
  
     0.690
ACD15951.1
KEGG: bxe:Bxe_A2939 putative transmembrane protein.
  
     0.678
ACD16370.1
KEGG: bxe:Bxe_A2239 putative transmembrane protein.
  
     0.648
ACD16377.1
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: bxe:Bxe_A2229 polysaccharide transporter, (PST) family.
 
  
 0.639
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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