STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD16386.1PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A2222 conserved protein possibly involved in utilization of glycolate. (134 aa)    
Predicted Functional Partners:
ACD20710.1
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_A2221 glycolate oxidase iron-sulfur subunit.
 
  
 0.663
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
  
 0.658
ACD15142.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_A3980 glycolate oxidase iron-sulfur subunit.
 
  
 0.632
ACD19787.1
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_B1176 putative oxidoreductase.
 
  
 0.487
ACD20709.1
PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A2220 glycolate oxidase FAD binding subunit.
 
  
 0.457
ACD15143.1
PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A3979 glycolate oxidase FAD binding subunit.
 
  
 0.435
ACD16980.1
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_A1547 hypothetical protein.
  
  
 0.412
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.