STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD16390.1TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_A2214 putative NAD(P)H-dependent nitrite reductase, large subunit. (846 aa)    
Predicted Functional Partners:
ACD16391.1
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: bxe:Bxe_A2213 putative ferredoxin subunit of nitrate/nitrite reductase (NADPH).
 0.998
ACD16393.1
PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2211 major facilitator superfamily (MFS)nitrate/nitrite transporter, NarK/NasA family.
 
 
 0.967
ACD17010.1
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bxe:Bxe_A1522 glutamine synthetase type I.
    
 0.922
ACD17754.1
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: bxe:Bxe_A0596 putative Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.916
ACD16413.1
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: bcm:Bcenmc03_6419 glutamate--putrescine ligase.
    
 0.911
ACD19036.1
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: bxe:Bxe_B0942 glutamate--ammonia ligase.
    
 0.911
ACD16392.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: bxe:Bxe_A2212 putative assimilatory nitrate reductase/sulfite reductase, NasA/NapA/NarB/FdhF; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.909
ACD18900.1
PFAM: NAD-glutamate dehydrogenase; KEGG: bxe:Bxe_B0842 putative NAD-glutamate dehydrogenase.
    
  0.908
ACD14857.1
PFAM: 2-nitropropane dioxygenase NPD; KEGG: bxe:Bxe_A4276 putative 2-nitropropane dioxygenase.
     
 0.901
ACD14817.1
PFAM: 2-nitropropane dioxygenase NPD; KEGG: bxe:Bxe_A4328 putative 2-nitropropane dioxygenase.
     
  0.900
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.