STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD16424.1PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B1425 hypothetical protein. (143 aa)    
Predicted Functional Partners:
azoR
NAD(P)H dehydrogenase (quinone); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
       0.776
ACD16740.1
PFAM: NmrA family protein; KEGG: bch:Bcen2424_5604 NmrA family protein.
 
     0.664
ACD18726.1
NmrA family protein; PFAM: dihydrodipicolinate reductase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: reu:Reut_A1579 NAD-dependent epimerase/dehydratase:dTDP-4-dehydrorhamnose reductase:NmrA-like.
 
     0.656
ACD21440.1
PFAM: alpha/beta hydrolase fold; KEGG: sme:SMb20216 putative epoxide hydrolase protein.
  
     0.512
ACD20904.1
KEGG: bxe:Bxe_B2586 hypothetical protein.
  
     0.504
ACD20459.1
KEGG: bxe:Bxe_B2386 hypothetical protein.
  
     0.501
ACD20500.1
PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_II2254 epoxide hydrolase.
  
     0.483
ACD20504.1
PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_II2254 epoxide hydrolase.
  
     0.482
ACD16426.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A4687 hypothetical protein.
  
    0.476
ACD16431.1
PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bxe:Bxe_B3003 metal dependent phosphohydrolase, HD region.
  
     0.473
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.