STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD16427.1TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_C6204 RND efflux system, outer membrane lipoprotein, NodT. (504 aa)    
Predicted Functional Partners:
ACD16428.1
PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_A3583 MFS efflux pump, membrane fusion protein, EmrA subfamily.
 
 
 0.880
ACD18531.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; OmpA/MotB domain protein; KEGG: rme:Rmet_1701 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.702
ACD17649.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_A0708 membrane fusion protein, RND efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.699
ACD16812.1
PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_4314 secretion protein HlyD.
 
 
 0.681
ACD16046.1
TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_A2816 MFS efflux system, membrane fusion protein, EmrA subfamily.
 
 
 0.675
ACD21280.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_4760 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.674
ACD18907.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B0849 RND efflux pump, membrane fusion protein, CzcB subfamily; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.658
ACD16426.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A4687 hypothetical protein.
 
     0.640
ACD15990.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_A2907 RND efflux pump, membrane fusion protein, CzcB subfamily; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.637
ACD16429.1
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5791 drug resistance transporter, EmrB/QacA subfamily.
 
  
 0.615
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.