STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD16540.1TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: bxe:Bxe_A2121 putative diguanylate cyclase (GGDEF domain). (343 aa)    
Predicted Functional Partners:
ACD15693.1
KEGG: bxe:Bxe_A3273 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 0.920
ACD15091.1
KEGG: bxe:Bxe_A4032 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 0.889
ACD15983.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: bxe:Bxe_A2913 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 0.875
ACD21257.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_B0796 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).
  
 0.875
ACD14620.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: bur:Bcep18194_C7111 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains).
 
 0.862
ACD18429.1
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: bxe:Bxe_B0499 putative diguanylate phosphodiesterase (EAL domain).
 
  
 0.847
ACD16028.1
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: bxe:Bxe_A2834 putative diguanylate phosphodiesterase (EAL domain).
 
  
 0.844
ACD14840.1
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: bxe:Bxe_A4292 putative diguanylate phosphodiesterase (EAL domain).
 
  
 0.836
ACD15995.1
Diguanylate phosphodiesterase; PFAM: EAL domain protein; KEGG: pfo:Pfl_0264 putative diguanylate phosphodiesterase (EAL domain).
 
  
 0.833
ACD14851.1
Diguanylate cyclase/phosphodiesterase; PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: bxe:Bxe_A4283 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains).
 
  
 0.832
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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