STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD16896.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A1637 ABC peptide transporter, inner membrane subunit. (345 aa)    
Predicted Functional Partners:
ACD16895.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A1638 ABC peptide transporter, inner membrane subunit.
  
 0.972
ACD16894.1
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1639 ABC peptide transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
  
 0.959
ACD16897.1
PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A1636 ABC peptide transporter, periplasmic ligand binding protein.
 
  
 0.936
ACD15864.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A2992 ABC transporter, inner membrane subunit.
  
  
 
0.901
ACD15865.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A2991 ABC transporter, inner membrane subunit.
  
 0.881
ACD15863.1
PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A2993 ABC peptide transporter, periplasmic ligand binding protein.
 
  
 0.835
ACD15866.1
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A2990 ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
  
 0.818
ACD20621.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet0354 putative ABC-transporter permease.
   
 0.719
ACD17569.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0788 ABC oligopeptide/dipeptide transporter, inner membrane subunit.
   
 0.678
ACD18812.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0755 ABC oligopeptide/dipeptide transporter, inner membrane subunit.
   
 0.641
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.