STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD16913.1PFAM: inositol monophosphatase; KEGG: bxe:Bxe_A1619 inositol-1(or 4)-monophosphatase. (267 aa)    
Predicted Functional Partners:
ACD17197.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A1332 putative oxidoreductase.
    
 0.911
ACD17198.1
Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A1331 myo-inositol 2-dehydrogenase.
    
 0.911
ACD17103.1
KEGG: bxe:Bxe_A1415 non-hemolytic phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756.
     
  0.900
ACD18644.1
PFAM: phosphoesterase; KEGG: bmn:BMA10247_A1822 phosphoesterase family protein.
     
  0.900
ACD19382.1
PFAM: phosphoesterase; KEGG: bcm:Bcenmc03_6008 phospholipase C.
     
  0.900
ACD19544.1
Phospholipase C; PFAM: phosphoesterase; KEGG: bxe:Bxe_A2871 phospholipase C.
     
  0.900
ACD20295.1
PFAM: phosphoesterase; KEGG: bmu:Bmul_6095 phosphoesterase.
     
  0.900
ACD21382.1
KEGG: bxe:Bxe_B0211 non-hemolytic phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756.
     
  0.900
nusG
NusG antitermination factor; Participates in transcription elongation, termination and antitermination.
   
 
 0.836
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
  
 
 0.828
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.