STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD17170.1PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A1351 putative FAD-binding oxidoreductase. (472 aa)    
Predicted Functional Partners:
ACD17169.1
KEGG: bxe:Bxe_A1352 hypothetical protein.
 
     0.680
ACD15143.1
PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A3979 glycolate oxidase FAD binding subunit.
  
 0.646
ACD17168.1
TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: bxe:Bxe_A1353 putative Trp repressor binding protein; Belongs to the WrbA family.
       0.622
ACD17171.1
PFAM: metallophosphoesterase; KEGG: bxe:Bxe_A1350 calcineurin-like phosphoesterase.
       0.621
ACD17167.1
PFAM: ribonuclease BN; KEGG: bxe:Bxe_A1354 ribonuclease BN.
       0.470
ACD20716.1
L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mag:amb4454 L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase.
 
 0.452
ACD17981.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bxe:Bxe_A0365 glutamate synthase (ferredoxin).
     
 0.437
ACD17378.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: bxe:Bxe_A0999 electron transfer flavoprotein, alpha subunit.
 
 
 0.421
ACD18571.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: bxe:Bxe_A0999 electron transfer flavoprotein, alpha subunit.
 
 
 0.421
ACD17172.1
PFAM: protein of unknown function DUF159; KEGG: bxe:Bxe_A1349 hypothetical protein; Belongs to the SOS response-associated peptidase family.
       0.407
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.