STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD17205.1PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bxe:Bxe_A1324 putative myo-inositol catabolism LolE protein. (305 aa)    
Predicted Functional Partners:
ACD17204.1
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_A1325 putative myo-inositol catabolism LolD protein; Belongs to the TPP enzyme family.
 
 
 0.998
ACD17198.1
Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A1331 myo-inositol 2-dehydrogenase.
 
 
 0.988
ACD17197.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A1332 putative oxidoreductase.
 
 
 0.987
ACD17203.1
PFAM: PfkB domain protein; KEGG: bxe:Bxe_A1326 putative myo-inositol catabolism LolC protein.
  
 0.981
ACD17206.1
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: bxe:Bxe_A1323 putative myo-inositol catabolism LolB protein.
 
  
 0.977
ACD16134.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A2511 putative oxidoreductase, Gfo/Idh/MocA family.
 
 
 0.948
ACD18265.1
Oxidoreductase domain protein; PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A0059 putative oxidoreductase.
  
 
 0.940
ACD20088.1
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: mlo:mll4976 hypothetical protein.
 
  
 0.905
ACD17201.1
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1328 ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
    0.879
ACD17202.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A1327 ABC sugar transporter, ATPase subunit.
 
    0.867
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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