STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD18903.1PFAM: purine nucleoside permease; KEGG: bxe:Bxe_B0845 concentrative nucleoside/H+ anitporter, CNT family. (357 aa)    
Predicted Functional Partners:
ACD15904.1
KEGG: rso:RS01997 hypothetical signal peptide protein.
  
     0.469
ACD18902.1
PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B0844 putative aldo/keto reductase.
       0.468
ACD19212.1
PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1816 hypothetical protein.
  
     0.462
ACD20228.1
KEGG: rso:RSc1547 hypothetical protein.
  
     0.451
ACD15216.1
TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_A3886 putative xanthine dehydrogenase.
 
     0.408
ACD17433.1
TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_A0950 xanthine dehydrogenase, subunit A.
 
     0.406
ACD17224.1
PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A1305 putative NUDIX family hydrolase.
  
     0.402
ACD17801.1
Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A0546 ABC sugar(arabinose) transporter, periplasmic ligand binding protein.
  
     0.400
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.