STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD18963.1KEGG: bxe:Bxe_A1492 hypothetical protein. (166 aa)    
Predicted Functional Partners:
ACD18964.1
TIGRFAM: TonB family protein; KEGG: bxe:Bxe_B0897 TonB protein.
  
     0.437
ACD15633.1
KEGG: bxe:Bxe_A3327 hypothetical protein.
  
     0.410
ACD20887.1
KEGG: bxe:Bxe_B2571 hypothetical protein.
  
     0.401
ACD21361.1
PFAM: heat shock protein DnaJ domain protein; KEGG: bxe:Bxe_B0191 putative DnaJ domain protein.
  
     0.400
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.