STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD19005.1KEGG: bxe:Bxe_B0918 hypothetical protein. (182 aa)    
Predicted Functional Partners:
ACD21520.1
PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B0446 transcriptional regulator, TetR family.
 
     0.694
ACD19495.1
PFAM: regulatory protein TetR; KEGG: bpt:Bpet1592 transcriptional regulator, TetR family.
 
     0.676
ACD19821.1
PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B1146 transcriptional regulator, TetR family.
 
     0.608
ACD19006.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_B0919 transcriptional regulator, XRE family.
       0.511
ACD19683.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pat:Patl_0274 redoxin.
 
   
 0.501
ACD19044.1
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.480
ACD19515.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pat:Patl_0274 redoxin.
 
   
 0.440
ACD19502.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: xau:Xaut_2933 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
 
   
 0.427
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.