STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD19195.1KEGG: bxe:Bxe_B1833 hypothetical protein. (420 aa)    
Predicted Functional Partners:
ACD19196.1
PFAM: Carbohydrate-selective porin OprB; KEGG: bxe:Bxe_B1832 carbohydrate-selective porin, OprB family.
 
     0.950
ACD19194.1
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
     0.877
ACD19192.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1836 ABC Fe+3 transporter, inner membrane subunit.
 
     0.777
ACD19193.1
PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B1835 ABC Fe+3 transporter, periplasmic ligand binding protein.
 
     0.762
ACD21412.1
KEGG: bxe:Bxe_B0243 hypothetical protein.
  
     0.672
ACD16026.1
KEGG: bxe:Bxe_A2836 putative transmembrane protein.
  
     0.671
ACD19191.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B1837 ABC Fe+3 transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
     0.632
ACD14845.1
PFAM: Ion transport 2 domain protein; K channel inward rectifier conserved region 2 domain protein; KEGG: bxe:Bxe_A4289 putative inward rectifier potassium channel.
  
     0.598
ACD20054.1
KEGG: bxe:Bxe_B1012 hypothetical protein.
 
     0.569
ACD18427.1
PFAM: porin Gram-negative type; KEGG: bps:BPSL0041 outer membrane porin lipoprotein precursor.
  
     0.558
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.