STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACD19240.1PFAM: protein of unknown function DUF1089; KEGG: bxe:Bxe_B1793 hypothetical protein. (184 aa)    
Predicted Functional Partners:
ACD17489.1
KEGG: bxe:Bxe_A0897 hypothetical protein.
  
     0.568
ACD19745.1
PFAM: regulatory protein LuxR; KEGG: bxe:Bxe_B1220 transcriptional regulator, LuxR family.
  
     0.544
ACD19239.1
PFAM: Urea transporter; KEGG: bxe:Bxe_B1794 UreA transporter.
 
     0.515
ACD20497.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: psb:Psyr_5111 dTDP-glucose 4,6-dehydratase.
  
     0.507
ACD16369.1
KEGG: bxe:Bxe_A2240 putative glycosyltransferase group 1, RfaG-like.
  
     0.493
ACD15877.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bcm:Bcenmc03_5104 GCN5-related N-acetyltransferase.
  
     0.483
ACD18920.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_B0860 transcriptional regulator, XRE family.
  
     0.478
ACD19014.1
PFAM: protein of unknown function DUF1330; KEGG: bur:Bcep18194_B2715 protein of unknown function DUF1330.
  
     0.463
ACD18452.1
KEGG: bxe:Bxe_B0522 putative iron reductase.
  
     0.453
ACD18460.1
KEGG: bxe:Bxe_B0528 hypothetical protein.
  
     0.446
Your Current Organism:
Paraburkholderia phytofirmans
NCBI taxonomy Id: 398527
Other names: Burkholderia phytofirmans PsJN, Burkholderia sp. PsJN, P. phytofirmans PsJN, Paraburkholderia phytofirmans PsJN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.