Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_0028PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_4066 ABC transporter related. (272 aa)    
Predicted Functional Partners:
Daci_0030
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4064 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.939
Daci_0029
PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_4065 extracellular ligand-binding receptor.
 
  
 0.918
Daci_0031
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4063 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.916
Daci_1156
PFAM: inner-membrane translocator; KEGG: aav:Aave_0784 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.859
Daci_4821
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1004 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.843
Daci_1157
PFAM: inner-membrane translocator; KEGG: aav:Aave_0785 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.836
Daci_5353
PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3363 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.812
Daci_0261
PFAM: inner-membrane translocator; KEGG: reh:H16_B2038 ABC-type transporter, permease component: HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
 0.809
Daci_3027
PFAM: inner-membrane translocator; KEGG: maq:Maqu_3337 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.805
Daci_0027
PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_4067 AMP-dependent synthetase and ligase.
 
    0.789
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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