Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0031PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4063 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (293 aa)    
Predicted Functional Partners:
Daci_0030
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_4064 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
Daci_0032
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpa:BPP2037 high-affinity branched-chain amino acid transport ATP-binding protein.
 
  
 0.965
Daci_0029
PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_4065 extracellular ligand-binding receptor.
 
  
 0.922
Daci_0028
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_4066 ABC transporter related.
 
  
 0.916
Daci_0261
PFAM: inner-membrane translocator; KEGG: reh:H16_B2038 ABC-type transporter, permease component: HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
 0.877
Daci_5353
PFAM: inner-membrane translocator; KEGG: ajs:Ajs_3363 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.865
Daci_4821
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1004 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.862
Daci_4818
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1001 ABC transporter related.
 
  
 0.847
Daci_0079
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_0212 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.843
Daci_4486
PFAM: inner-membrane translocator; KEGG: bbr:BB4420 probable branched-chain amino acid transport system, permease component.
  
 0.841
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.