STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0053KEGG: ajs:Ajs_0032 methyltransferase type 12. (273 aa)    
Predicted Functional Partners:
Daci_4628
KEGG: aav:Aave_3317 hypothetical protein.
  
     0.755
Daci_0622
PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_3839 putative signal transduction protein.
  
     0.706
Daci_3594
PFAM: CheW domain protein; KEGG: mpt:Mpe_A2970 hypothetical protein.
  
     0.664
Daci_0621
KEGG: ajs:Ajs_3809 flagellar protein FliT.
  
     0.619
Daci_0539
PFAM: YiaAB two helix domain protein; KEGG: aav:Aave_4490 YiaAB two helix domain protein.
  
     0.596
Daci_0052
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: aav:Aave_0066 peptidoglycan-binding domain 1 protein.
 
     0.591
Daci_2847
KEGG: ajs:Ajs_3158 hypothetical protein.
 
     0.577
Daci_0601
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
     0.570
Daci_2035
PFAM: Sporulation domain protein; KEGG: aav:Aave_3575 sporulation domain protein.
  
     0.556
Daci_5266
PFAM: Anti sigma-E protein RseA family protein; KEGG: ajs:Ajs_3273 anti sigma-E protein, RseA.
  
     0.556
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.