STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0074TIGRFAM: benzoyl-CoA-dihydrodiol lyase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: vei:Veis_0732 enoyl-CoA hydratase/isomerase. (556 aa)    
Predicted Functional Partners:
Daci_0073
KEGG: pna:Pnap_2943 benzoyl-CoA oxygenase component B.
 
 
 0.995
Daci_0072
TIGRFAM: benzoyl-CoA oxygenase/reductase, BoxA protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: vei:Veis_0734 oxidoreductase FAD/NAD(P)-binding domain protein.
 
 
 0.993
aroK
Transcriptional regulator, XRE family with shikimate kinase activity; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
   
 0.897
Daci_0076
TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_B1918 benzoate-coenzyme A ligase.
 
 
 0.869
Daci_0077
PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_2950 extracellular ligand-binding receptor.
 
     0.668
groS
Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
    
 
 0.594
Daci_0177
Thiolase; KEGG: ajs:Ajs_0129 thiolase.
 
 0.592
Daci_3702
PFAM: Cupin 2 conserved barrel domain protein; KEGG: pna:Pnap_3145 cupin 2, conserved barrel domain protein.
  
     0.534
Daci_2366
Histidine kinase; KEGG: pap:PSPA7_4410 virulence sensor protein BvgS; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: extracellular solute-binding protein family 3.
  
 
 0.527
Daci_2367
SMART: extracellular solute-binding protein family 3; KEGG: pap:PSPA7_4410 virulence sensor protein BvgS.
   
 
 0.524
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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