STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0120PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_0081 acyl-CoA dehydrogenase domain protein. (564 aa)    
Predicted Functional Partners:
Daci_3313
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_1684 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
 0.722
Daci_1529
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_3623 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.681
Daci_2388
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ajs:Ajs_2812 enoyl-CoA hydratase/isomerase.
  
 0.681
Daci_1339
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_0594 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.673
Daci_1393
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: ajs:Ajs_3739 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.673
Daci_0119
PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A3296 AMP-dependent synthetase and ligase.
  
    0.661
Daci_3751
PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_2038 AMP-dependent synthetase and ligase.
  
 0.618
Daci_0121
PFAM: regulatory protein TetR; KEGG: bam:Bamb_0108 transcriptional regulator, TetR family.
 
     0.606
Daci_4824
PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_1006 AMP-dependent synthetase and ligase.
 
 
  0.599
Daci_3306
PFAM: AMP-dependent synthetase and ligase; KEGG: ajs:Ajs_1678 AMP-dependent synthetase and ligase.
 
 
  0.597
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.