STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0190PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reh:H16_B2004 NADPH:quinone reductase or related Zn-dependent oxidoreductase. (339 aa)    
Predicted Functional Partners:
Daci_0191
PFAM: conserved hypothetical protein; KEGG: reh:H16_B2005 probable extra-cytoplasmic solute receptor.
       0.773
Daci_1668
PFAM: MaoC domain protein dehydratase; KEGG: aav:Aave_3913 MaoC domain protein dehydratase.
 
 0.708
Daci_5626
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pau:PA14_29460 putative quinone oxidoreductase.
  
     0.682
Daci_0189
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B2003 predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
  
  
 0.602
Daci_3286
PFAM: aminoglycoside phosphotransferase; KEGG: ajs:Ajs_1778 aminoglycoside phosphotransferase.
 
   0.601
Daci_4753
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: bbt:BBta_6813 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase.
  
  
 0.529
Daci_3285
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aav:Aave_3077 acyl-CoA dehydrogenase domain protein.
 
 
 0.523
Daci_3362
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: aav:Aave_2871 alcohol dehydrogenase, zinc-binding domain protein.
 
  
 0.506
Daci_4755
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: aav:Aave_3732 beta-ketoacyl synthase.
  
 
 0.470
Daci_0188
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_4850 transcriptional regulator, LysR family.
       0.445
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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