Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_0231PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rso:RSc2102 probable transcription regulator protein. (268 aa)    
Predicted Functional Partners:
Daci_0230
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: aav:Aave_0211 extracellular solute-binding protein, family 3.
 
     0.802
Daci_3782
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mlo:mll6988 transcriptional regulator.
  
  
 0.790
Daci_3752
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_2039 transcriptional regulator, GntR family.
  
  
 0.789
Daci_1021
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_B0314 transcriptional regulator, GntR-family.
  
  
 0.787
Daci_3053
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_2754 transcriptional regulator, GntR family.
  
  
 0.785
Daci_2281
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_A0034 transcriptional regulator, GntR-family.
  
  
 0.775
Daci_1351
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pna:Pnap_2731 transcriptional regulator, GntR family.
  
  
 0.767
Daci_2111
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_1118 transcriptional regulator, GntR family.
  
  
 0.757
Daci_3836
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pmy:Pmen_0702 transcriptional regulator, GntR family.
  
  
 0.756
Daci_5832
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reu:Reut_B3951 regulatory protein GntR, HTH:GntR, C-terminal.
  
  
 0.751
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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