Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0253PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_1995 GntR domain protein. (262 aa)    
Predicted Functional Partners:
Daci_3784
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bbr:BB1600 putative GntR-family transcriptional regulator.
  
  
 0.767
Daci_3782
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mlo:mll6988 transcriptional regulator.
  
  
 0.765
Daci_4432
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pna:Pnap_0602 transcriptional regulator, GntR family.
  
  
 0.762
Daci_1021
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_B0314 transcriptional regulator, GntR-family.
  
  
 0.754
Daci_3062
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_2754 transcriptional regulator, GntR family.
  
  
 0.746
Daci_2111
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_1118 transcriptional regulator, GntR family.
  
  
 0.728
Daci_6022
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: aav:Aave_4749 GntR domain protein.
  
     0.724
Daci_2281
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_A0034 transcriptional regulator, GntR-family.
  
  
 0.704
Daci_1351
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pna:Pnap_2731 transcriptional regulator, GntR family.
  
  
 0.691
Daci_4254
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reh:H16_A0034 transcriptional regulator, GntR-family.
  
  
 0.657
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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