STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0261PFAM: inner-membrane translocator; KEGG: reh:H16_B2038 ABC-type transporter, permease component: HAAT family; Belongs to the binding-protein-dependent transport system permease family. (324 aa)    
Predicted Functional Partners:
Daci_0260
PFAM: inner-membrane translocator; KEGG: reh:H16_B2037 ABC-type transporter, permease component: HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
0.995
Daci_0262
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reu:Reut_B3658 ABC transporter related.
  
 0.979
Daci_0263
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_B2040 ABC-type transporter, ATPase component: HAAT family.
  
 0.968
Daci_5354
PFAM: inner-membrane translocator; KEGG: aav:Aave_1875 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.931
Daci_0264
PFAM: Extracellular ligand-binding receptor; KEGG: rme:Rmet_3976 extracellular ligand-binding receptor.
 
  
 0.918
Daci_4818
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1001 ABC transporter related.
  
 0.900
Daci_4334
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_3256 ABC transporter related.
  
 0.897
Daci_6024
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2565 ABC branched chain amino acid family transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
  
 0.894
Daci_5352
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_1877 ABC transporter-related protein.
  
 0.887
Daci_3028
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tth:TTC0969 branched-chain amino acid transport ATP-binding protein livG.
  
 0.886
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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