STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0265KEGG: xft:PD0997 hypothetical protein. (112 aa)    
Predicted Functional Partners:
Daci_0560
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; KEGG: rpb:RPB_0468 hypothetical protein.
  
     0.576
Daci_5816
KEGG: reh:H16_B1205 hypothetical protein.
  
     0.523
Daci_0266
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc1763 gluconate 5-dehydrogenase.
       0.505
Daci_3256
KEGG: aav:Aave_1783 carbohydrate-binding family V/XII.
  
     0.476
Daci_5834
KEGG: vei:Veis_2291 putative transcriptional regulators, CopG/Arc/MetJ family.
  
     0.455
Daci_1332
Hypothetical protein; KEGG: aav:Aave_1629 carbohydrate-binding family V/XII.
  
     0.437
Daci_3917
KEGG: reu:Reut_B5656 hypothetical protein.
  
     0.429
Daci_4508
KEGG: hhe:HH1512 hypothetical protein.
  
     0.427
Daci_2437
KEGG: eba:ebA2161 hypothetical protein.
  
     0.405
Daci_4393
PFAM: metallophosphoesterase; KEGG: ilo:IL0118 calcineurin-like phosphoesterase.
  
     0.403
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.