STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0317KEGG: aav:Aave_0265 hypothetical protein. (69 aa)    
Predicted Functional Partners:
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
    0.795
Daci_1663
PFAM: Domain of unknown function DUF1841; KEGG: aav:Aave_3950 hypothetical protein.
  
     0.738
Daci_2239
PFAM: Rieske [2Fe-2S] domain protein; KEGG: ajs:Ajs_1035 Rieske (2Fe-2S) domain protein.
  
     0.699
Daci_1454
PFAM: protein of unknown function DUF484; KEGG: ajs:Ajs_3687 protein of unknown function DUF484.
 
     0.661
Daci_0514
KEGG: aav:Aave_4527 putative proline rich signal peptide protein.
  
     0.654
Daci_5166
KEGG: ajs:Ajs_0971 putative transmembrane protein.
  
     0.633
Daci_0315
KEGG: aav:Aave_0263 hypothetical protein.
       0.623
Daci_5405
KEGG: aav:Aave_3701 hypothetical protein.
  
     0.623
Daci_2180
KEGG: aav:Aave_1165 hypothetical protein.
  
     0.616
Daci_5587
TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: aav:Aave_0986 cytochrome c assembly protein.
  
    0.606
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.