STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0366PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_0307 ABC transporter-related protein. (267 aa)    
Predicted Functional Partners:
Daci_0365
PFAM: protein of unknown function DUF140; KEGG: vei:Veis_0920 protein of unknown function DUF140.
 
 0.998
Daci_0367
PFAM: Mammalian cell entry related domain protein; KEGG: vei:Veis_0922 mammalian cell entry related domain protein.
 
 0.993
Daci_5535
PFAM: protein of unknown function DUF140; KEGG: aav:Aave_1014 protein of unknown function DUF140.
 
 0.981
Daci_5534
PFAM: Mammalian cell entry related domain protein; KEGG: ajs:Ajs_0750 mammalian cell entry related domain protein.
  
 0.972
Daci_2917
KEGG: ajs:Ajs_2592 ABC-type transport system ipermease component.
  
 0.963
Daci_2918
PFAM: Mammalian cell entry related domain protein; KEGG: aav:Aave_1818 mammalian cell entry related domain protein.
 
 0.953
Daci_5536
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0748 ABC transporter related.
  
  
 
0.911
Daci_5531
KEGG: vei:Veis_2402 sulfate transporter/antisigma-factor antagonist STAS.
  
 0.887
Daci_5532
PFAM: toluene tolerance family protein; KEGG: ajs:Ajs_0752 toluene tolerance family protein.
  
 
 0.878
Daci_0368
KEGG: ajs:Ajs_0253 putative lipoprotein.
 
    0.837
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.