STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0371TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pna:Pnap_1243 hemerythrin-like metal-binding protein. (166 aa)    
Predicted Functional Partners:
Daci_5584
PFAM: beta-lactamase domain protein; KEGG: aav:Aave_0991 beta-lactamase domain protein.
 
  
 0.680
Daci_1264
PFAM: beta-lactamase domain protein; KEGG: aav:Aave_4202 beta-lactamase domain protein.
  
     0.630
Daci_2565
KEGG: vei:Veis_1577 hypothetical protein.
  
     0.614
Daci_3007
KEGG: ajs:Ajs_2549 hypothetical protein.
  
     0.567
Daci_5004
KEGG: ajs:Ajs_1187 putative transmembrane protein.
  
     0.555
Daci_0881
PFAM: Sporulation domain protein; KEGG: aav:Aave_4630 sporulation domain protein.
  
     0.544
Daci_5328
KEGG: ajs:Ajs_3321 hypothetical protein.
  
     0.540
Daci_1082
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0647 transcriptional regulator, LysR family.
  
     0.527
Daci_2904
KEGG: aav:Aave_1802 hypothetical protein.
  
 
   0.516
Daci_4952
KEGG: aav:Aave_2989 hypothetical protein.
 
     0.516
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.