Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daci_0372PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: aav:Aave_0319 multiple antibiotic resistance (MarC)-related protein. (215 aa)    
Predicted Functional Partners:
Daci_0373
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: ajs:Ajs_0260 carboxymethylenebutenolidase.
       0.547
Daci_2389
PFAM: MscS Mechanosensitive ion channel; KEGG: aav:Aave_2167 MscS mechanosensitive ion channel.
 
    0.518
Daci_5558
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ajs:Ajs_0741 glutamate synthase (ferredoxin).
     
 0.423
Daci_2326
PFAM: MscS Mechanosensitive ion channel; KEGG: pmy:Pmen_0559 MscS mechanosensitive ion channel.
  
    0.415
Daci_5470
PFAM: MscS Mechanosensitive ion channel; KEGG: aav:Aave_3656 MscS mechanosensitive ion channel.
  
    0.415
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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