STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0427KEGG: pna:Pnap_0262 hypothetical protein. (183 aa)    
Predicted Functional Partners:
Daci_0426
KEGG: aav:Aave_0383 alpha/beta hydrolase fold.
       0.797
Daci_4804
PFAM: alpha/beta hydrolase fold; KEGG: ajs:Ajs_2756 alpha/beta hydrolase fold.
  
     0.669
Daci_4871
PFAM: RDD domain containing protein; KEGG: ajs:Ajs_1765 RDD domain containing protein.
  
     0.667
Daci_0829
PFAM: branched-chain amino acid transport; KEGG: ajs:Ajs_4055 branched-chain amino acid transport.
 
     0.642
Daci_2423
KEGG: aav:Aave_2200 protein of unknown function DUF339.
  
     0.620
Daci_5004
KEGG: ajs:Ajs_1187 putative transmembrane protein.
  
     0.607
Daci_4910
KEGG: aav:Aave_2634 putative inner membrane transmembrane protein.
  
     0.593
Daci_5003
PFAM: molybdopterin binding domain; KEGG: aav:Aave_1441 molybdopterin binding domain.
  
     0.585
Daci_0423
PFAM: protein of unknown function DUF477; KEGG: aav:Aave_0379 protein of unknown function DUF477.
 
     0.570
Daci_3981
KEGG: ajs:Ajs_2126 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
     0.565
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.