STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0445PFAM: copper resistance protein CopC; KEGG: rme:Rmet_6114 copper resistance protein CopC. (128 aa)    
Predicted Functional Partners:
Daci_0444
PFAM: copper resistance D domain protein; KEGG: rso:RSp0659 probable copper resistance D transmembrane protein.
 
  
 0.973
Daci_0446
Heavy metal translocating P-type ATPase; KEGG: neu:NE1216 haloacid dehalogenase/epoxide hydrolase family:E1-E2 ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein.
     
 0.704
Daci_2338
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpd:BURPS668_1706 oxidoreductase, pyridine nucleotide-disulphide family.
    
   0.632
Daci_2353
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: ccr:CC_3525 ferredoxin reductase.
    
   0.632
Daci_0449
PFAM: copper resistance B precursor; KEGG: ajs:Ajs_1234 copper resistance B precursor.
 
   
 0.614
Daci_0525
PFAM: protein of unknown function DUF461; KEGG: pna:Pnap_1514 protein of unknown function DUF461.
  
    0.554
Daci_2688
PFAM: protein of unknown function DUF461; KEGG: ajs:Ajs_3343 protein of unknown function DUF461.
  
    0.554
Daci_2890
PFAM: protein of unknown function DUF461; KEGG: rfr:Rfer_0618 protein of unknown function DUF461.
  
    0.554
Daci_2895
PFAM: protein of unknown function DUF461; KEGG: ajs:Ajs_3343 protein of unknown function DUF461.
  
    0.554
Daci_0443
KEGG: ajs:Ajs_2717 hypothetical protein.
       0.475
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.