STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0488PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpt:Mpe_A2346 hypothetical protein. (156 aa)    
Predicted Functional Partners:
Daci_0487
Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: mpt:Mpe_A2347 TC repressor.
 
   
 0.862
Daci_0489
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mpt:Mpe_A2345 arsenate reductase, putative.
  
 0.826
Daci_0490
TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: har:HEAR1962 arsenite efflux pump ACR3.
  
  
 0.790
Daci_0491
TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: har:HEAR1960 arsenate reductase (glutaredoxin).
 
     0.739
Daci_0492
TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: ajs:Ajs_1284 NADPH-dependent FMN reductase.
  
  
 0.720
Daci_5436
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aav:Aave_3613 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
  
 0.487
Daci_0493
Hypothetical protein.
       0.483
Daci_4382
Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: ajs:Ajs_3055 regulatory protein, ArsR.
 
   
 0.474
Daci_2289
Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: ajs:Ajs_2514 regulatory protein, ArsR.
 
   
 0.468
Daci_0486
Transcriptional regulator, MerR family; TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_1301 putative transcriptional regulator, MerR family.
     
 0.457
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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