STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0526KEGG: ajs:Ajs_3888 hypothetical protein. (318 aa)    
Predicted Functional Partners:
Daci_0527
KEGG: aav:Aave_4508 domain of unknown function DUF1745.
 
     0.796
Daci_3591
ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.749
Daci_5447
KEGG: rfr:Rfer_1303 hypothetical protein.
  
     0.725
Daci_5328
KEGG: ajs:Ajs_3321 hypothetical protein.
  
     0.721
Daci_2851
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: aav:Aave_1583 integral membrane sensor signal transduction histidine kinase.
  
     0.719
Daci_5696
KEGG: vei:Veis_3528 putative general secretory pathway N transmembrane protein.
  
     0.684
Daci_5692
KEGG: vei:Veis_3524 hypothetical protein.
  
     0.683
Daci_1123
KEGG: vei:Veis_0989 hypothetical protein.
 
     0.679
Daci_5694
PFAM: General secretion pathway L; KEGG: aav:Aave_0920 hypothetical protein.
  
     0.679
Daci_4871
PFAM: RDD domain containing protein; KEGG: ajs:Ajs_1765 RDD domain containing protein.
  
     0.669
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.