STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daci_0527KEGG: aav:Aave_4508 domain of unknown function DUF1745. (411 aa)    
Predicted Functional Partners:
Daci_0526
KEGG: ajs:Ajs_3888 hypothetical protein.
 
     0.796
Daci_5447
KEGG: rfr:Rfer_1303 hypothetical protein.
  
     0.662
Daci_4952
KEGG: aav:Aave_2989 hypothetical protein.
  
     0.563
Daci_1249
PFAM: dihydroneopterin aldolase; KEGG: ajs:Ajs_0495 dihydroneopterin aldolase.
  
     0.547
Daci_0379
PFAM: Mg2 transporter protein CorA family protein; KEGG: aav:Aave_0326 Mg2+ transporter protein, CorA family protein.
  
     0.546
Daci_5459
KEGG: aav:Aave_3642 hypothetical protein.
  
     0.507
Daci_0875
PFAM: regulatory protein MarR; KEGG: ajs:Ajs_4000 transcriptional regulator, MarR family.
  
     0.467
Daci_4736
PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_2488 major facilitator superfamily MFS_1.
  
     0.457
Daci_1123
KEGG: vei:Veis_0989 hypothetical protein.
 
     0.428
Daci_5694
PFAM: General secretion pathway L; KEGG: aav:Aave_0920 hypothetical protein.
  
     0.413
Your Current Organism:
Delftia acidovorans
NCBI taxonomy Id: 398578
Other names: D. acidovorans SPH-1, Delftia acidovorans SPH-1, Delftia acidovorans str. SPH-1, Delftia acidovorans strain SPH-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.